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As of 21-Aug-2019 number of released structures: 10343
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NDB ID: 6DF9  PDB ID: 6DF9 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
112D_DA12:DT25_E0.4570.0150.2910.587-18.8683.844
113D_DA13:DT24_E-0.176-0.3610.3579.294-13.707-3.046
115D_DA15:DT22_E-0.106-0.2990.3683.704-13.9042.49
116D_DA16:DT21_E-0.118-0.1750.169-0.136-19.078-2.345
13D_DC3:DG34_E-0.711-0.1120.0599.864-17.02-1.275
16D_DC6:DG31_E0.118-0.2550.128-13.594-13.525-1.199
17D_DC7:DG30_E0.217-0.1780.372-20.355-4.0461.114
110D_DC10:DG27_E0.04-0.0950.2543.204-10.2170.102
111D_DC11:DG26_E0.033-0.1950.0150.155-0.671-2.173
117D_DC17:DG20_E0.767-0.3180.177-1.444-16.717-0.828
12D_DG2:DC35_E-1.167-0.490.1928.092-8.419-0.303
19D_DG9:DC28_E-0.169-0.0110.3956.149-10.931.3
118D_DG18:DC19_E-0.85-0.359-0.47-3.819-9.6511.137
11D_DT1:DA36_E-0.397-0.201-0.297-7.901-4.1734.369
14D_DT4:DA33_E-0.413-0.1270.284-3.005-16.5445.467
15D_DT5:DA32_E-0.046-0.163-0.2322.169-13.662.53
18D_DT8:DA29_E0.049-0.190.166-2.2420.536-0.901
114D_DT14:DA23_E-0.618-0.230.268.393-7.2284.844

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.