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As of 14-Aug-2019 number of released structures: 10334
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NDB ID: 6DF9  PDB ID: 6DF9 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
112DD_DA12DA13:DT24DT25_EE-0.244-0.1963.264-2.712-4.96235.6050.3920.0083.27-8.0524.436.037
113DD_DA13DT14:DA23DT24_EE0.768-0.8433.30.88-7.19630.65-0.154-1.2443.425-13.379-1.63631.475
115DD_DA15DA16:DT21DT22_EE-0.274-0.1693.3450.176-4.4438.3010.3080.4373.342-6.739-0.26838.549
116DD_DA16DC17:DG20DT21_EE0.389-0.5873.2980.744-1.40539.143-0.705-0.493.322-2.096-1.1139.174
13DD_DC3DT4:DA33DG34_EE0.412-0.783.5390.5244.08637.327-1.782-0.5673.4436.361-0.81637.545
16DD_DC6DC7:DG30DG31_EE0.5090.0273.534-1.1533.1938.237-0.389-0.933.5094.8581.75638.381
17DD_DC7DT8:DA29DG30_EE-0.880.7892.9352.03510.41121.647-1.2572.7242.90625.819-5.04824.078
110DD_DC10DC11:DG26DG27_EE1.450.3323.3937.9676.35134.955-0.438-1.1063.6310.306-12.92736.365
111DD_DC11DA12:DT25DG26_EE-0.891.113.124-2.8360.12838.9241.6461.0023.1820.1924.24939.024
117DD_DC17DG18:DC19DG20_EE0.3161.3483.3876.5456.3224.9391.1031.2113.58114.051-14.55126.522
12DD_DG2DC3:DG34DC35_EE-0.342-0.3643.230.7163.60436.025-1.0830.6493.1735.809-1.15336.205
19DD_DG9DC10:DG27DC28_EE0.271-0.5393.3162.6784.99929.19-2.1030.0363.1939.802-5.25129.724
11DD_DT1DG2:DC35DA36_EE-0.0411.82.954-5.8531.80332.3842.892-0.8443.0083.19710.37832.943
14DD_DT4DT5:DA32DA33_EE0.005-0.2963.0773.872-2.58634.565-0.1240.5473.073-4.327-6.4834.868
15DD_DT5DC6:DG31DA32_EE0.023-0.6153.644-1.836-1.73839.951-0.677-0.2683.662-2.5412.68440.028
18DD_DT8DG9:DC28DA29_EE-0.4251.5183.33-4.6142.48341.0821.8710.0883.4383.5216.54241.401
114DD_DT14DA15:DT22DA23_EE0.149-0.3863.3210.877-0.22141.999-0.515-0.1153.325-0.308-1.22442.008

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.