A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Aug-2019 number of released structures: 10334
Search for released structures

NDB ID: 6DM7  PDB ID: 6DM7 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
15A_DC5:DG14_B0.429-0.1150.068-3.501-2.948-0.204
11A_DG1:DC18_B-0.403-0.112-0.272-2.6240.52-0.881
12A_DG2:DC17_B-0.5-0.124-0.235-5.285-10.3560.84
13A_DG3:DC16_B-0.544-0.146-0.142-4.706-11.440.654
14A_DG4:DC15_B-0.49-0.1410.026-4.994-5.015-0.132
16A_DG6:DC13_B-0.395-0.1120.1096.198-4.197-0.394
17A_DG7:DC12_B-0.498-0.148-0.0042.356-10.4490.111
18A_DG8:DC11_B-0.557-0.148-0.163-8.761-12.7730.336
19A_DG9:DC10_B-0.384-0.079-0.231-14.579-11.671-0.447

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.