A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Aug-2019 number of released structures: 10343
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NDB ID: 6DM7  PDB ID: 6DM7 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
15AA_DC5DG6:DC13DG14_BB0.025-0.6053.006-0.4057.08226.967-2.774-0.1382.75914.8620.8527.867
11AA_DG1DG2:DC17DC18_BB0.138-1.5563.423-0.7087.35527.329-4.863-0.4432.90915.2171.46628.292
12AA_DG2DG3:DC16DC17_BB-0.061-0.9653.289-1.5215.03633.456-2.456-0.1363.1158.6812.62233.856
13AA_DG3DG4:DC15DC16_BB-0.13-1.2183.269-1.0562.70932.534-2.6280.0523.1634.8241.87932.661
14AA_DG4DC5:DG14DC15_BB0.604-0.7453.2951.7191.56438.274-1.331-0.7043.2862.382-2.61938.342
16AA_DG6DG7:DC12DC13_BB0.228-1.7023.352-1.0854.65830.888-4.029-0.6263.0598.682.02231.247
17AA_DG7DG8:DC11DC12_BB-0.438-1.653.496-0.9226.06630.894-4.2010.6313.13411.2481.70931.482
18AA_DG8DG9:DC10DC11_BB0.351-1.413.4851.8056.15734.525-3.29-0.3043.20810.263-3.00935.098

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.