A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 6DO9  PDB ID: 6DO9 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_A1:DT6_C0.024-0.108-0.123-5.397-5.711-0.843
13B_A3:DT4_C0.085-0.168-0.188-6.625-11.6871.716
12B_C2:DG5_C0.199-0.1740.0813.345-12.5372.166
14B_U4:DA3_C-0.053-0.1750.02-1.952-11.5941.371
15b_C5:DG2_C0.18-0.230.181-8.284-8.5590.112
16b_G6:DC1_C-0.186-0.116-0.048-5.741-5.579-1.945

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.