A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 29-Jun-2022 number of released structures: 12153
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NDB ID: 6DO9  PDB ID: 6DO9 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11BB_A1C2:DG5DT6_CC0.725-1.1333.168-1.8683.16735.907-2.254-1.4213.025.123.0236.089
13BB_A3U4:DA3DT4_CC1.003-2.1683.2771.8012.91425.114-5.765-1.7793.0726.663-4.11825.343
12BB_C2A3:DT4DG5_CC-0.563-1.453.4821.80510.97327.326-5.1431.4842.67122.101-3.63529.462
14Bb_U4C5:DG2DA3_CC-0.221-1.9993.3820.1884.96533.398-4.2390.4113.068.58-0.32433.755
15bb_C5G6:DC1DG2_CC0.934-2.1583.3095.7824.26322.753-6.601-0.3913.00210.475-14.20723.845

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.