A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 29-Jun-2022 number of released structures: 12153
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NDB ID: 6DOA  PDB ID: 6DOA 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_A1:DT6_C0.118-0.116-0.203-8.054-5.461-1.501
13B_A3:DT4_C0.14-0.101-0.231-6.367-10.2752.674
12B_C2:DG5_C0.075-0.181-0.010.928-10.4221.302
14B_U4:DA3_C0.035-0.194-0.006-3.495-13.6633.653
15b_C5:DG2_C0.129-0.2470.059-9.435-6.297-0.129
16b_G6:DC1_C-0.191-0.164-0.105-3.4-4.291-0.729

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.