A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 6DOB  PDB ID: 6DOB 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_A1:DT6_C0.09-0.137-0.128-5.908-5.2090.442
13B_A3:DT4_C0.081-0.21-0.249-6.746-9.841.58
12B_C2:DG5_C0.176-0.1410.033.175-11.5192.111
14B_U4:DA3_C0.046-0.1510.047-0.726-13.9622.129
15b_C5:DG2_C0.184-0.2010.154-7.669-8.3591.558
16b_G6:DC1_C-0.172-0.209-0.098-5.329-5.528-1.722

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.