A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 29-Jun-2022 number of released structures: 12153
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NDB ID: 6DOB  PDB ID: 6DOB 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11BB_A1C2:DG5DT6_CC0.67-1.0973.173-1.3782.35335.399-2.128-1.2923.0693.8622.26235.501
13BB_A3U4:DA3DT4_CC1.097-2.1383.2351.1782.55125.296-5.56-2.1633.0555.802-2.6825.449
12BB_C2A3:DT4DG5_CC-0.437-1.423.5332.52411.43726.557-5.3351.4242.65523.498-5.18528.982
14Bb_U4C5:DG2DA3_CC-0.211-1.9373.3971.3216.26133.562-4.2750.5642.98710.721-2.26334.149
15bb_C5G6:DC1DG2_CC0.845-2.1363.3665.9844.27621.63-6.9270.0083.01410.993-15.38422.832

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.