A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 29-Jun-2022 number of released structures: 12153
Search for released structures

NDB ID: 6DOC  PDB ID: 6DOC 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_A1:DT6_C0.151-0.159-0.096-5.663-5.5391.572
13B_A3:DT4_C0.132-0.164-0.25-8.215-10.9252.65
12B_C2:DG5_C0.208-0.208-0.022.744-11.342.747
14B_U4:DA3_C-0.025-0.24-0.141-3.662-13.531.638
15b_C5:DG2_C0.124-0.180.024-12.18-4.2751.32
16b_G6:DC1_C-0.288-0.193-0.007-4.428-8.187-0.043

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.