A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
Search for released structures

NDB ID: 6DOC  PDB ID: 6DOC 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11BB_A1C2:DG5DT6_CC0.646-1.1653.192-0.6713.38435.158-2.398-1.163.0585.5851.10735.321
13BB_A3U4:DA3DT4_CC1.105-2.0613.2963.5171.68424.416-5.332-1.4993.2733.949-8.24824.72
12BB_C2A3:DT4DG5_CC-0.333-1.3713.5742.65512.60925.439-5.6611.2822.57226.57-5.59528.468
14Bb_U4C5:DG2DA3_CC0.131-1.6283.472.0546.13335.656-3.4990.0843.1599.915-3.32136.219
15bb_C5G6:DC1DG2_CC0.886-2.0723.2355.3386.53519.661-8.053-0.3752.5718.099-14.78321.379

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.