A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-May-2019 number of released structures: 10174
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NDB ID: 6DOE  PDB ID: 6DOE 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_A1:DT6_C0.142-0.137-0.263-7.394-7.95-0.197
13B_A3:DT4_C0.101-0.138-0.242-7.893-10.5552.245
12B_C2:DG5_C0.183-0.187-0.0151.912-10.7822.147
14B_U4:DA3_C0.009-0.181-0.059-4.433-13.2092.423
15b_C5:DG2_C0.149-0.2460.118-9.743-4.0660.638
16b_G6:DC1_C-0.194-0.21-0.097-4.106-6.786-2.359

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.