A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Aug-2019 number of released structures: 10343
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NDB ID: 6DOE  PDB ID: 6DOE 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11BB_A1C2:DG5DT6_CC0.558-1.1893.211-1.9883.49935.674-2.41-1.1783.055.693.23235.893
13BB_A3U4:DA3DT4_CC1.104-2.033.342.51.42224.93-5.1-1.7873.3143.279-5.76825.093
12BB_C2A3:DT4DG5_CC-0.307-1.3363.5742.50312.66825.291-5.6461.2042.58126.819-5.29828.349
14Bb_U4C5:DG2DA3_CC0.099-1.6843.4141.9595.45635.813-3.4750.1173.1338.801-3.1636.264
15bb_C5G6:DC1DG2_CC0.938-2.1153.2616.1076.11420.314-7.744-0.2362.68316.41-16.39122.058

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.