A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 6DOK  PDB ID: 6DOK 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_A1:DT6_C0.147-0.138-0.088-4.419-5.673-0.23
13B_A3:DT4_C0.089-0.129-0.289-6.934-11.651.403
12B_C2:DG5_C0.12-0.1770.1092.473-12.5032.376
14B_U4:DA3_C-0.029-0.165-0.125-4.627-9.4491.221
15b_C5:DG2_C0.024-0.2550.184-9.216-5.2950.852
16b_G6:DC1_C-0.279-0.150.131-2.567-9.521-0.832

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.