A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 29-Jun-2022 number of released structures: 12153
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NDB ID: 6DOK  PDB ID: 6DOK 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11BB_A1C2:DG5DT6_CC0.707-1.083.213-1.7454.07235.475-2.323-1.3933.0376.6512.8535.741
13BB_A3U4:DA3DT4_CC0.967-2.1693.3352.6672.94125.092-5.777-1.4333.1486.715-6.08925.399
12BB_C2A3:DT4DG5_CC-0.442-1.4293.4913.41111.79126.782-5.2721.582.57223.923-6.92129.414
14Bb_U4C5:DG2DA3_CC0.048-1.8243.40.6193.87433.328-3.8010.023.1746.726-1.07533.552
15bb_C5G6:DC1DG2_CC0.984-1.9873.1415.0787.13522.31-6.876-0.8862.55117.594-12.52123.947

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.