A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
Search for released structures

NDB ID: 6DOM  PDB ID: 6DOM 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_A1:DT6_C0.102-0.167-0.062-3.015-6.751-0.429
13B_A3:DT4_C0.11-0.135-0.191-7.144-10.9761.401
12B_C2:DG5_C0.111-0.1760.1013.267-13.9930.538
14B_U4:DA3_C-0.052-0.178-0.022-2.907-9.8491.475
15b_C5:DG2_C0.079-0.1960.211-8.797-7.8750.92
16b_G6:DC1_C-0.17-0.166-0.002-4.969-8.254-1.049

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.