A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
Search for released structures

NDB ID: 6DON  PDB ID: 6DON 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_A1:DT6_C0.131-0.1220.015-3.098-7.3410.049
13B_A3:DT4_C0.05-0.09-0.212-5.621-11.0391.95
12B_C2:DG5_C0.06-0.1650.1052.961-12.3410.869
14B_U4:DA3_C-0.015-0.194-0.053-3.413-8.6741.206
15b_C5:DG2_C0.058-0.1780.187-9.05-7.2110.213
16b_G6:DC1_C-0.216-0.1550.112-3.582-9.497-0.927

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.