6DON: Base Pair Morphology Step Parameters

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As of 29-Jun-2022 number of released structures: 12153

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NDB ID: 6DON PDB ID: 6DON

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	1	BB_A1C2:DG5DT6_CC	0.703	-1.048	3.208	-1.744	3.427	35.146	-2.212	-1.405	3.059	5.655	2.878	35.349
1	3	BB_A3U4:DA3DT4_CC	1.004	-2.187	3.323	2.392	3.44	25.397	-5.862	-1.592	3.084	7.756	-5.395	25.735
1	2	BB_C2A3:DT4DG5_CC	-0.39	-1.466	3.462	2.732	11.029	27.129	-5.189	1.339	2.627	22.31	-5.527	29.372
1	4	Bb_U4C5:DG2DA3_CC	-0.109	-1.996	3.378	0.758	4.072	32.697	-4.209	0.321	3.111	7.197	-1.34	32.951
1	5	bb_C5G6:DC1DG2_CC	0.971	-2.018	3.193	5.138	6.466	22.892	-6.674	-0.809	2.681	15.653	-12.438	24.318

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.