A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 29-Jun-2022 number of released structures: 12153
Search for released structures

NDB ID: 6DON  PDB ID: 6DON 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11BB_A1C2:DG5DT6_CC0.703-1.0483.208-1.7443.42735.146-2.212-1.4053.0595.6552.87835.349
13BB_A3U4:DA3DT4_CC1.004-2.1873.3232.3923.4425.397-5.862-1.5923.0847.756-5.39525.735
12BB_C2A3:DT4DG5_CC-0.39-1.4663.4622.73211.02927.129-5.1891.3392.62722.31-5.52729.372
14Bb_U4C5:DG2DA3_CC-0.109-1.9963.3780.7584.07232.697-4.2090.3213.1117.197-1.3432.951
15bb_C5G6:DC1DG2_CC0.971-2.0183.1935.1386.46622.892-6.674-0.8092.68115.653-12.43824.318

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.