A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 29-Jun-2022 number of released structures: 12153
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NDB ID: 6DOO  PDB ID: 6DOO 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_A1:DT6_C0.08-0.125-0.102-5.255-5.332-1.451
13B_A3:DT4_C0.076-0.144-0.204-6.418-11.581.522
12B_C2:DG5_C0.124-0.1720.0393.713-12.4651.215
14B_U4:DA3_C-0.002-0.13-0.003-1.237-11.6522.146
15b_C5:DG2_C0.145-0.1980.138-8.675-8.2860.783
16b_G6:DC1_C-0.158-0.127-0.022-3.957-5.737-1.676

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.