A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 29-Jun-2022 number of released structures: 12153
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NDB ID: 6DOO  PDB ID: 6DOO 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11BB_A1C2:DG5DT6_CC0.774-1.0993.155-1.1563.09734.885-2.265-1.453.0235.1511.92235.036
13BB_A3U4:DA3DT4_CC1.023-2.2113.2551.8823.37825.393-5.89-1.7913.0077.629-4.24925.681
12BB_C2A3:DT4DG5_CC-0.522-1.4163.51.36511.35428.265-4.9371.2622.71422.139-2.66130.447
14Bb_U4C5:DG2DA3_CC-0.264-1.9833.4260.4684.87332.498-4.3430.5473.18.646-0.83132.855
15bb_C5G6:DC1DG2_CC0.941-2.0953.2575.5474.43123.008-6.407-0.5272.94910.783-13.524.065

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.