A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 6DOP  PDB ID: 6DOP 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_A1:DT6_C0.2-0.138-0.089-1.388-6.4231.159
13B_A3:DT4_C0.126-0.159-0.265-7.322-11.7251.304
12B_C2:DG5_C0.217-0.180.1732.962-13.8632.519
14B_U4:DA3_C-0.03-0.147-0.115-4.152-8.703-0.072
15b_C5:DG2_C0.089-0.1780.163-9.083-6.2292.079
16b_G6:DC1_C-0.27-0.166-0.013-3.158-7.967-0.314

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.