A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 6DOP  PDB ID: 6DOP 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11BB_A1C2:DG5DT6_CC0.751-1.0343.244-2.4524.43535.242-2.314-1.5723.0387.2794.02435.593
13BB_A3U4:DA3DT4_CC0.969-2.1653.3093.1081.55524.327-5.572-1.3113.2623.666-7.32624.57
12BB_C2A3:DT4DG5_CC-0.56-1.4163.4773.78612.19326.982-5.2081.8512.51624.469-7.59729.8
14Bb_U4C5:DG2DA3_CC0.169-1.8963.3540.444.2833.4-3.965-0.2223.0967.409-0.76233.668
15bb_C5G6:DC1DG2_CC0.994-2.0323.2216.5066.44121.196-7.202-0.3442.67916.551-16.71723.068

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.