A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 29-Jun-2022 number of released structures: 12153
Search for released structures

NDB ID: 6DOT  PDB ID: 6DOT 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_A1:DT6_C0.194-0.1710.001-3.526-6.6671.463
13B_A3:DT4_C0.119-0.123-0.201-6.502-11.9671.53
12B_C2:DG5_C0.003-0.1820.1591.694-13.522.75
14B_U4:DA3_C-0.049-0.162-0.056-5.82-8.6340.424
15b_C5:DG2_C0.072-0.1740.217-6.848-8.0111.004
16b_G6:DC1_C-0.157-0.1440.036-4.295-9.618-0.603

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.