6DOU: Base Pair Morphology Step Parameters

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As of 22-Jun-2022 number of released structures: 12128

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NDB ID: 6DOU PDB ID: 6DOU

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	1	BB_A1C2:DG5DT6_CC	0.684	-1.129	3.141	-0.792	3.227	34.64	-2.352	-1.258	3.011	5.404	1.327	34.794
1	3	BB_A3U4:DA3DT4_CC	1.077	-2.125	3.278	3.18	3.564	25.161	-5.783	-1.548	3.063	8.088	-7.218	25.603
1	2	BB_C2A3:DT4DG5_CC	-0.412	-1.387	3.493	2.457	10.742	27.403	-4.982	1.325	2.721	21.6	-4.941	29.497
1	4	Bb_U4C5:DG2DA3_CC	-0.245	-1.939	3.472	-0.571	6.436	32.398	-4.51	0.334	3.045	11.393	1.012	33.019
1	5	bb_C5G6:DC1DG2_CC	0.893	-2.08	3.202	5.836	5.446	22.192	-6.807	-0.348	2.761	13.595	-14.57	23.567

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.