6DOW: Base Pair Morphology Step Parameters

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As of 29-Jun-2022 number of released structures: 12153

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NDB ID: 6DOW PDB ID: 6DOW

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	1	BB_A1C2:DG5DT6_CC	0.748	-1.199	3.22	-0.076	4.138	35.279	-2.548	-1.236	3.062	6.798	0.125	35.514
1	3	BB_A3U4:DA3DT4_CC	1.193	-2.033	3.301	2.062	3.592	24.915	-5.678	-2.139	3.069	8.252	-4.737	25.251
1	2	BB_C2A3:DT4DG5_CC	-0.362	-1.381	3.492	3.217	11.374	26.403	-5.243	1.427	2.624	23.462	-6.637	28.885
1	4	Bb_U4C5:DG2DA3_CC	-0.238	-1.811	3.403	0.141	6.149	34.808	-3.887	0.412	3.048	10.181	-0.233	35.33
1	5	bb_C5G6:DC1DG2_CC	0.861	-2.107	3.308	7.269	5.082	21.518	-6.947	0.323	2.875	12.928	-18.489	23.254

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.