6DP0: Base Pair Morphology Step Parameters

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As of 29-Jun-2022 number of released structures: 12153

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NDB ID: 6DP0 PDB ID: 6DP0

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	1	BB_A1C2:DG5DT6_CC	0.729	-1.064	3.18	-0.924	3.709	33.998	-2.365	-1.379	3.031	6.318	1.574	34.206
1	3	BB_A3U4:DA3DT4_CC	0.876	-2.21	3.385	4.366	0.791	24.731	-5.325	-0.667	3.415	1.828	-10.091	25.12
1	2	BB_C2A3:DT4DG5_CC	-0.494	-1.417	3.478	1.087	12.992	27.164	-5.307	1.167	2.529	25.857	-2.164	30.077
1	4	Bb_U4C5:DG2DA3_CC	0.124	-1.904	3.288	-0.858	3.478	33.407	-3.85	-0.352	3.076	6.028	1.487	33.593
1	5	bb_C5G6:DC1DG2_CC	0.916	-2.042	3.286	6.385	7.101	23.577	-6.591	-0.331	2.717	16.535	-14.867	25.412

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.