A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 6DP1  PDB ID: 6DP1 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11BB_A1C2:DG5DT6_CC0.687-1.0783.24-1.6953.59735.34-2.274-1.3653.0845.9022.78235.556
13BB_A3U4:DA3DT4_CC0.963-2.1663.3882.6292.37825.052-5.651-1.423.2545.447-6.02225.298
12BB_C2A3:DT4DG5_CC-0.38-1.473.4453.66912.20326.223-5.4681.5212.45825.098-7.54529.106
14Bb_U4C5:DG2DA3_CC0.198-1.7333.2991.5743.6334.279-3.475-0.0933.1116.134-2.6634.5
15bb_C5G6:DC1DG2_CC1.031-2.013.144.8687.21621.594-7.213-1.0542.51518.33-12.36523.262

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.