A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 1-Dec-2021 number of released structures: 11785
Search for released structures

NDB ID: 6DP5  PDB ID: 6DP5 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_A1:DT6_C0.256-0.1650.026-2.844-5.4980.821
13B_A3:DT4_C0.14-0.087-0.231-5.173-10.5152.615
12B_C2:DG5_C0.119-0.1560.1345.316-13.006-0.323
14B_U4:DA3_C-0.002-0.158-0.089-1.116-11.0562.775
15b_C5:DG2_C0.121-0.1930.199-6.516-7.7940.611
16b_G6:DC1_C-0.177-0.130.055-5.346-8.701-1.203

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.