A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 1-Dec-2021 number of released structures: 11785
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NDB ID: 6DP5  PDB ID: 6DP5 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11BB_A1C2:DG5DT6_CC0.678-1.0673.152-1.6733.20934.462-2.257-1.3813.0095.3982.81434.646
13BB_A3U4:DA3DT4_CC1.012-2.2523.2781.8274.624.457-6.52-1.8232.87910.718-4.25624.945
12BB_C2A3:DT4DG5_CC-0.456-1.4393.5072.31310.22228.974-4.7011.3092.80519.638-4.44430.773
14Bb_U4C5:DG2DA3_CC-0.277-1.9683.4350.164.3332.245-4.2790.5223.1497.752-0.28732.527
15bb_C5G6:DC1DG2_CC0.906-2.0363.2915.6697.03822.876-6.843-0.4712.69816.922-13.6324.574

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.