6DP6: Base Pair Morphology Step Parameters

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As of 22-Jun-2022 number of released structures: 12128

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NDB ID: 6DP6 PDB ID: 6DP6

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	1	BB_A1C2:DG5DT6_CC	0.677	-1.115	3.23	-0.5	2.7	34.772	-2.259	-1.203	3.128	4.509	0.835	34.877
1	3	BB_A3U4:DA3DT4_CC	1.078	-2.235	3.33	1.466	4.389	25.651	-6.123	-2.001	2.969	9.784	-3.268	26.058
1	2	BB_C2A3:DT4DG5_CC	-0.435	-1.399	3.461	1.143	10.922	27.872	-4.923	1.074	2.712	21.641	-2.265	29.917
1	4	Bb_U4C5:DG2DA3_CC	-0.38	-1.872	3.413	1.755	5.008	32.564	-4.147	0.967	3.075	8.857	-3.103	32.982
1	5	bb_C5G6:DC1DG2_CC	0.932	-1.996	3.295	5.032	6.077	23.038	-6.571	-0.691	2.82	14.675	-12.151	24.334

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.