A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 6DPF  PDB ID: 6DPF 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_A1:DT6_C0.231-0.201-0.1750.992-3.108-3.281
13B_A3:DT4_C0.159-0.085-0.297-5.941-11.3222.749
12B_C2:DG5_C0.047-0.1390.0635.851-13.4560.447
14B_U4:DA3_C0.056-0.14-0.272-2.251-11.1253.864
15b_C5:DG2_C0.173-0.1560.017-6.888-9.5972.341
16b_G6:DC1_C-0.222-0.1490.021-7.929-12.146-0.468

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.