A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 6DPF  PDB ID: 6DPF 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11BB_A1C2:DG5DT6_CC0.738-0.853.227-4.5641.50234.685-1.631-1.8923.0692.5057.6135.006
13BB_A3U4:DA3DT4_CC1.125-2.2423.2564.3644.59224.202-6.493-1.3492.94110.719-10.18825.006
12BB_C2A3:DT4DG5_CC-0.3-1.4443.5282.0369.77728.953-4.6850.9752.87218.86-3.92830.592
14Bb_U4C5:DG2DA3_CC-0.115-1.7883.4391.1885.52532.441-4.1030.4063.0959.796-2.10632.916
15bb_C5G6:DC1DG2_CC0.905-1.953.345.378.04621.555-7.324-0.5072.620.251-13.51523.602

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.