A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 6DPL  PDB ID: 6DPL 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_A1:DT6_C0.154-0.15-0.174-9.024-4.401-2.322
13B_A3:DT4_C0.122-0.153-0.219-5.397-10.2342.341
12B_C2:DG5_C0.089-0.190.034-1.883-9.2352.15
14B_U4:DA3_C0.022-0.4560.1530.022-10.4061.626
15b_C5:DG2_C0.174-0.2390.176-6.974-10.9070.323
16b_G6:DC1_C-0.199-0.111-0.082-7.116-6.883-1.208

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.