A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 6DPL  PDB ID: 6DPL 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11BB_A1C2:DG5DT6_CC0.636-1.3463.221-1.6174.04635.401-2.76-1.2623.0236.6232.64735.659
13BB_A3U4:DA3DT4_CC0.982-1.8323.199-1.3492.67126.235-4.682-2.4892.9485.8612.9626.402
12BB_C2A3:DT4DG5_CC-0.322-1.4083.4093.40811.42525.32-5.4911.4342.48924.412-7.28327.946
14Bb_U4C5:DG2DA3_CC-0.207-2.0923.3331.2314.24934.666-4.1130.5273.0557.094-2.05634.939
15bb_C5G6:DC1DG2_CC0.947-2.1563.3786.3114.6323.687-6.392-0.2883.05410.905-14.86324.929

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.