A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 6DPO  PDB ID: 6DPO 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_A1:DT6_C0.124-0.092-0.057-6.575-5.3631.693
13B_A3:DT4_C0.133-0.155-0.233-7.711-9.3751.513
12B_C2:DG5_C0.076-0.1990.1040.078-13.0592.441
14B_U4:DA3_C-0.074-0.1780.051-2.728-8.5950.179
15b_C5:DG2_C0.05-0.1880.199-6.929-6.5150.879
16b_G6:DC1_C-0.295-0.255-0.051-5.272-5.374-4.257

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.