A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 29-Jun-2022 number of released structures: 12153
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NDB ID: 6DPO  PDB ID: 6DPO 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11BB_A1C2:DG5DT6_CC0.657-1.2123.205-1.3093.88334.554-2.593-1.293.0296.5082.19334.789
13BB_A3U4:DA3DT4_CC0.923-2.163.2731.711.37824.617-5.463-1.6413.2053.224-4.00124.714
12BB_C2A3:DT4DG5_CC-0.446-1.4853.4453.30811.9626.303-5.4671.5832.47524.614-6.80829.036
14Bb_U4C5:DG2DA3_CC0.04-2.0543.3320.6672.60533.972-3.9170.0373.1714.449-1.13934.075
15bb_C5G6:DC1DG2_CC0.834-2.1333.3377.4827.05921.603-7.3680.3352.65617.605-18.65923.901

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.