A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 6DPP  PDB ID: 6DPP 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11BB_A1C2:DG5DT6_CC0.682-1.1823.196-0.6672.93935.06-2.377-1.2243.0774.8671.10535.185
13BB_A3U4:DA3DT4_CC1.15-2.0483.2611.5683.57226.475-5.321-2.0923.0257.746-3.426.756
12BB_C2A3:DT4DG5_CC-0.35-1.43.5061.78810.67626.532-5.2251.1092.7222.126-3.70628.619
14Bb_U4C5:DG2DA3_CC-0.371-1.8993.4550.6636.44933.662-4.2390.7343.04211.009-1.13234.263
15bb_C5G6:DC1DG2_CC0.885-2.1123.3785.7613.39722.093-6.492-0.1573.1488.613-14.60923.071

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.