A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 6DWY  PDB ID: 6DWY 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_DA1:DT16_C0.9850.3-0.691-22.97-14.713-0.585
13B_DA3:DT14_C0.363-0.590.53714.89-0.447-0.787
15B_DA5:DT12_C-0.0090.0110.1983.397-2.842.168
16B_DA6:DT11_C0.403-0.3090.1582.720.82-6.935
18B_DA8:DT9_C0.575-0.1920.42418.128-8.256-13.152
19B_DA9:DT8_C-0.125-0.3540.44418.037-18.452-8.914
111B_DA11:DT6_C0.5840.1570.5692.633-10.55811.275
112B_DA12:DT5_C0.9950.4640.7735.568-8.351-8.704
114B_DA14:DT3_C0.406-0.2860.6624.572-21.9561.616
115B_DA15:DT2_C0.9050.0510.4436.519-21.064-8.22
17B_DC7:DG10_C0.35-0.3160.25912.168-6.893-3.704
110B_DC10:DG7_C0.188-0.4210.408-4.506-13.137-2.47
113B_DC13:DG4_C0.0740.146-0.1037.825-3.9857.978
12B_DG2:DC15_C0.12-0.1231.83224.5057.193-0.038
14B_DG4:DC13_C-0.395-0.180.2141.356-2.6110.945
116B_DG16:DC1_C1.7860.5741.3779.381-28.78425.936
119C_DA22:DT4_D0.0480.040.3464.165-5.499-9.582
118C_DC21:DG5_D-0.191-0.1860.636-3.372-15.102-5.101
120C_DC23:DG3_D0.821-0.4390.1162.234-8.206-12.982
122C_DC25:DG1_D2.218-0.7161.31323.42-35.615-0.671
121C_DG24:DC2_D-0.0960.311-0.0393.095-5.11211.457
117C_DT20:DA6_D0.7930.0892.055-21.4-7.3146.227

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.