A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
Search for released structures

NDB ID: 6DWY  PDB ID: 6DWY 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11BB_DA1DG2:DC15DT16_CC0.104-0.5642.037-27.40110.57526.8-1.572-2.0691.17617.46845.2639.56
13BB_DA3DG4:DC13DT14_CC-1.062-1.9323.699-3.6084.71725.197-5.7541.2693.40210.6268.12725.877
15BB_DA5DA6:DT11DT12_CC-0.721-0.6583.408-0.999-2.56433.59-0.6961.0733.466-4.4281.72633.699
16BB_DA6DC7:DG10DT11_CC0.43-0.9773.172-1.698-2.84832.182-1.26-1.0663.218-5.123.05332.348
18BB_DA8DA9:DT8DT9_CC0.468-0.7643.161-3.1990.18328.213-1.597-1.663.0850.3746.53628.391
19BB_DA9DC10:DG7DT8_CC1.147-1.3273.7541.805-5.56933.623-1.211-1.6153.971-9.538-3.09134.114
111BB_DA11DA12:DT5DT6_CC-1.187-0.8113.024-3.565-4.26834.98-0.7321.453.199-7.0465.88435.406
112BB_DA12DC13:DG4DT5_CC1.644-0.9863.2697.586-1.1326.833-1.756-1.4653.626-2.374-15.93827.889
114BB_DA14DA15:DT2DT3_CC-1.05-0.353.153-0.272.09537.746-0.7991.5873.1373.2360.41637.803
115BB_DA15DG16:DC1DT2_CC1.522-0.4863.286-3.494-9.19841.1150.273-2.4733.184-12.8764.89142.227
17BB_DC7DA8:DT9DG10_CC-1.709-0.2483.245-4.2230.00140.159-0.361.9923.40.0016.12940.371
110BB_DC10DA11:DT6DG7_CC0.074-0.173.177-1.0971.39841.731-0.38-0.2153.1671.9621.53941.768
113BB_DC13DA14:DT3DG4_CC-0.298-0.4073.421-4.1962.06539.39-0.853-0.0743.4083.056.19839.656
12BB_DG2DA3:DT14DC15_CC-0.312-1.473.5123.15715.09334.71-4.1690.882.63523.893-4.99837.885
14BB_DG4DA5:DT12DC13_CC-0.019-1.073.2650.1335.85329.627-3.2060.0633.00211.307-0.25630.187
118CC_DA22DC23:DG3DT4_DD-0.53-0.4973.595-2.482-0.54137.042-0.70.4663.629-0.853.90237.126
117CC_DC21DA22:DT4DG5_DD-0.749-0.5482.9960.17310.79836.003-2.1131.1842.72217.004-0.27337.536
119CC_DC23DG24:DC2DG3_DD0.9970.2323.4771.857-0.45634.7030.463-1.3663.52-0.764-3.11134.754
120CC_DG24DC25:DG1DC2_DD-1.00.4553.169-14.71.92342.9170.415-0.0413.3392.5419.41245.291
116CC_DT20DC21:DG5DA6_DD-1.591-0.3782.7266.736-10.2228.3930.8814.0392.295-19.718-12.99630.869

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.