A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-Jul-2019 number of released structures: 10288
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NDB ID: 6EKO  PDB ID: 6EKO 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
19FF_DA10DG11:DC3DT4_EE0.321-0.4063.393-1.4745.08130.067-1.808-0.913.2639.72.81530.518
11FF_DC1DG2:DC12DG13_EE-0.9220.0823.562-6.5836.29135.77-0.8230.4623.63110.04210.5136.874
13FF_DC3DT4:DA10DG11_EE0.111-0.3593.4992.2088.20830.408-2.2750.233.29215.277-4.1131.546
15FF_DC5DC6:DG8DG9_EE1.2160.9473.653-1.1347.91823.177-0.608-3.2733.70518.9962.72224.5
16FF_DC6DG8:DC6DG8_EE-0.1183.676.498-2.65125.07930.74-1.683-0.5767.36639.9424.22239.567
111FF_DC12DG13:DC1DG2_EE0.73-0.0423.978.16217.87138.545-2.2470.0063.68425.179-11.543.093
12FF_DG2DC3:DG11DC12_EE0.165-0.2063.1791.3453.4633.876-0.885-0.0753.1475.915-2.334.073
17FF_DG8DG9:DC5DC6_EE-1.3760.873.8490.393.02723.710.9263.4743.9057.329-0.94423.903
18FF_DG9DA10:DT4DC5_EE-0.0710.4593.7794.258-3.55447.9220.8810.473.719-4.359-5.22148.223
110FF_DG11DC12:DG2DC3_EE0.136-0.3873.1582.6222.59631.659-1.1610.2123.1174.739-4.78531.868
14FF_DT4DC5:DG9DA10_EE0.0050.6113.82-1.864-2.20946.2080.996-0.193.786-2.8112.37246.293

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.