A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 6F58  PDB ID: 6F58 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11C_DA2:DT23_D0.013-0.1390.274.848-18.3992.202
16C_DA7:DT18_D0.216-0.1870.1612.963-11.872-4.396
18C_DA9:DT16_D0.535-0.1520.58719.202-17.2611.282
112C_DA13:DT12_D0.3160.034-0.032-1.748-11.2071.352
119C_DA20:DT5_D0.357-0.2510.4389.615-18.8893.75
120C_DA21:DT4_D0.288-0.2470.74511.113-16.1237.944
121C_DA22:DT3_D-0.145-0.1580.374.868-13.9976.668
15C_DC6:DG19_D0.219-0.477-0.065-7.223-5.374-1.951
17C_DC8:DG17_D0.327-0.2090.181-1.75-5.403-1.562
19C_DC10:DG15_D0.637-0.1880.4096.625-8.631-2.5
110C_DC11:DG14_D0.298-0.1830.277-4.055-11.2965.36
113C_DG14:DC11_D-0.178-0.3320.1552.8-10.5580.657
114C_DG15:DC10_D-0.4470.0040.617-5.39-10.5370.437
116C_DG17:DC8_D-0.665-0.0550.1273.102-4.4611.937
118C_DG19:DC6_D-0.581-0.5650.1056.778-7.9961.096
12C_DT3:DA22_D-0.002-0.2060.047-0.939-17.7264.584
13C_DT4:DA21_D0.002-0.2660.416-9.336-13.9686.438
14C_DT5:DA20_D-0.142-0.1970.522-16.955-18.2912.121
111C_DT12:DA13_D-0.26-0.272-0.0020.19-10.429-2.102
115C_DT16:DA9_D-0.385-0.0390.599-17.961-15.0653.862
117C_DT18:DA7_D-0.325-0.240.1062.173-13.5030.058
122C_DT23:DA2_D0.501-0.3540.323-4.482-17.1581.879
123C_DT24:DA1_D0.29-0.5660.214-9.427-19.1491.596

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.