A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Sep-2019 number of released structures: 10386
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NDB ID: 6GCE  PDB ID: 6GCE 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
12DD_DC3DT4:DA11DG12_CC0.7860.0643.144-1.37911.69232.865-1.602-1.5152.9619.8872.34634.855
14DD_DC7DG8:DC7DG8_CC-0.090.6082.754-2.17217.4127.452-1.665-0.1822.66232.7854.08932.489
16DD_DC11DT12:DA3DG4_CC-0.772-0.3453.0393.64710.54328.329-2.5572.1282.62820.562-7.11230.404
11DD_DG2DC3:DG12DC13_CC0.3030.4033.0145.198.9337.136-0.4330.1483.04113.7-7.96338.497
13DD_DT4DA5:DT10DA11_CC-0.798-0.2793.437-5.4451.80731.513-0.8540.3963.5013.2939.92232.018
15DD_DT10DC11:DG4DA5_CC1.03-0.3583.2641.139-2.16634.502-0.266-1.5553.311-3.646-1.91734.586
17DD_DT12DC13:DG2DA3_CC0.348-0.3183.44-1.2639.01538.297-1.587-0.6743.27213.511.89239.324

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.