A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Aug-2019 number of released structures: 10343
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NDB ID: 6GDS  PDB ID: 6GDS 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
13A_DA3:DT8_B120
14A_DA4:DT7_B120
119A_DA9:DT2_D120
120A_DA10:DT1_D120
11A_DC1:DG10_B119
115A_DC5:DG6_D119
116A_DC6:DG5_D10
117A_DC7:DG4_D119
12A_DT2:DA9_B120
118A_DT8:DA3_D120
113C_DA3:DT8_D120
114C_DA4:DT7_D120
19C_DA9:DT2_B120
110C_DA10:DT1_B120
111C_DC1:DG10_D119
15C_DC5:DG6_B119
16C_DC6:DG5_B119
17C_DC7:DG4_B119
112C_DT2:DA9_D120
18C_DT8:DA3_B00

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)