A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 6GIS  PDB ID: 6GIS 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11DD_DA1DT2:DA9DT10_EE0.094-0.0843.428-1.523-2.90733.4950.351-0.4223.416-5.0282.63533.651
13DD_DA3DC4:DG7DT8_EE-0.203-0.0283.125-1.174-5.78136.1450.7160.1683.098-9.2411.87736.607
16DD_DA6DT7:DA4DT5_EE0.1640.2264.371-7.811.87137.7660.034-1.5354.2612.85111.90138.58
14DD_DC4DG5:DC6DG7_EE-0.0430.3393.2486.6143.57131.89-0.0131.2163.1936.389-11.83232.741
15DD_DG5DA6:DT5DC6_EE-0.3390.4743.353-0.6474.56238.7750.1410.4273.396.8420.9739.037
18DD_DG8DG9:DC2DC3_EE-0.2840.7252.903-8.892-8.19536.5261.997-0.542.68-12.65513.73238.411
19DD_DG9DG10:DC1DC2_EE0.3610.4562.6470.547-2.0737.9670.911-0.4992.624-3.178-0.8438.025
12DD_DT2DA3:DT8DA9_EE-0.0990.6822.8030.0220.45338.6890.9820.1522.810.684-0.03438.692
17DD_DT7DG8:DC3DA4_EE-0.1710.7353.0735.8446.93434.230.231.1073.08911.531-9.71935.376

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.