A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Aug-2019 number of released structures: 10343
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NDB ID: 6GLD  PDB ID: 6GLD 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_DC2:DG9_B0.072-0.0770.272-13.2736.9870.979
14B_DC5:DG6_B0.246-0.0720.305-3.613-5.1720.404
16B_DC7:DG4_B0.201-0.18-0.0749.062.142-1.127
17B_DC8:DG3_B0.235-0.0320.263-24.689-5.849-0.827
12B_DG3:DC8_B-0.235-0.0320.26324.689-5.849-0.827
13B_DG4:DC7_B-0.201-0.18-0.074-9.062.142-1.127
15B_DG6:DC5_B-0.246-0.0720.3053.613-5.1720.404
18B_DG9:DC2_B-0.072-0.0770.27213.2736.9870.979

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.