A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Aug-2019 number of released structures: 10334
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NDB ID: 6GLD  PDB ID: 6GLD 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11BB_DC2DG3:DC8DG9_BB-0.5371.6562.5811.0593.40819.6123.461.9642.7929.899-3.07719.931
14BB_DC5DG6:DC5DG6_BB0.00.9683.5030.025.30625.81-2.7840.03.20145.1480.035.995
16BB_DC7DC8:DG3DG4_BB0.1320.7965.2312.20750.67816.134-5.2760.122.40473.44-3.19853.068
17BB_DC8DG9:DC2DG3_BB0.5371.6562.581-1.0593.40819.6123.46-1.9642.7929.8993.07719.931
12BB_DG3DG4:DC7DC8_BB-0.1320.7965.231-2.20750.67816.134-5.276-0.122.40473.443.19853.068
13BB_DG4DC5:DG6DC7_BB-0.840.1763.218-3.235-4.09639.40.7310.8633.241-6.0424.77239.73
15BB_DG6DC7:DG4DC5_BB0.840.1763.2183.235-4.09639.40.731-0.8633.241-6.042-4.77239.73

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.