A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-Jul-2018 number of released structures: 9608
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NDB ID: 6GMY  PDB ID: 6GMY 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11AA_EAN2TCJ3:G18A19_BB0.188-1.6852.8697.9750.47532.846-2.9670.8142.8120.824-13.8533.778
16AA_EAN7EAN8:A13A14_BB-0.179-1.9753.1484.2370.10630.541-3.7351.1273.0890.199-7.99530.827
17AA_EAN8TCY9:U12A13_BB0.412-1.2813.144-2.4462.16930.229-2.852-1.2483.0054.1444.67330.401
13AA_F4Q4F4Q5:C16C17_BB-0.579-1.7633.2771.7035.94433.353-3.9321.2532.89710.248-2.93633.905
14AA_F4Q5TCJ6:G15C16_BB0.121-2.1243.0940.771-2.78330.873-3.451-0.0823.271-5.213-1.44531.005
12AA_TCJ3F4Q4:C17G18_BB-0.029-1.5393.3921.4987.89731.703-4.0770.3072.9314.171-2.68832.68
15AA_TCJ6EAN7:A14G15_BB-0.118-2.0653.4253.68-1.37932.163-3.4450.8983.473-2.477-6.61232.396

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.