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A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID:
6GO6
PDB ID:
6GO6
 
Base Pair Morphology Parameters
CSV Format
Model Number
Pair Number
Pair Name
Shear
Stretch
Stagger
Buckle
Propellor
Opening
1
1
F_DT1:DA5_E
-0.739
-0.208
-0.087
2.503
-8.428
3.011
1
2
F_DT2:DA4_E
-0.162
-0.035
-0.324
3.664
-16.128
3.829
1
3
F_DT3:DA3_E
0.019
-0.107
-0.09
0.705
-16.942
1.098
1
4
F_DT4:DA2_E
0.032
-0.055
-0.03
2.557
-7.571
-0.05
1
5
F_DT5:DA1_E
-0.186
-0.009
-0.098
8.046
-7.863
5.465
The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures',
Nucleic Acids Res
.
31(17)
, 5108-21. Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures',
Nat Protoc
.
3(7)
, 1213-27.