A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Aug-2019 number of released structures: 10343
Search for released structures

NDB ID: 6GO7  PDB ID: 6GO7 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11F_DA1:DT5_H-0.131-0.1140.086-4.282-11.1352.41
12F_DA2:DT4_H-0.062-0.026-0.0963.343-18.5481.962
13F_DA3:DT3_H-0.151-0.158-0.0751.701-15.6142.848
14F_DA4:DT2_H0.565-0.116-0.065.693-15.1741.104
15F_DA5:DT1_H0.597-0.1340.6459.697-27.088-5.563
16G_DA1:DT5_E-0.779-0.2730.107-9.547-13.01-2.436
17G_DA2:DT4_E0.0520.2550.1381.678-14.7987.682
18G_DA3:DT3_E-0.447-0.2480.1735.957-24.562-2.945
19G_DA4:DT2_E0.2210.312-0.080.745-23.5866.426
110G_DA5:DT5_I-0.172-3.226-0.13711.0523.07569.659

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.