6GO7: Base Pair Morphology Step Parameters

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As of 4-Dec-2019 number of released structures: 10490

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NDB ID: 6GO7 PDB ID: 6GO7

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	1	FF_DA1DA2:DT4DT5_HH	-0.202	0.076	3.13	2.386	4.164	26.589	-0.85	1.014	3.076	8.962	-5.135	27.011
1	2	FF_DA2DA3:DT3DT4_HH	0.483	-0.471	3.308	-0.281	5.266	28.388	-2.114	-1.032	3.166	10.622	0.568	28.864
1	3	FF_DA3DA4:DT2DT3_HH	0.137	-0.691	3.156	1.02	2.412	37.739	-1.363	-0.086	3.11	3.723	-1.575	37.826
1	4	FF_DA4DA5:DT1DT2_HH	0.287	-0.656	3.076	-6.657	-0.974	33.856	-0.964	-1.449	2.985	-1.653	11.292	34.499
1	5	GG_DA1DA2:DT4DT5_EE	0.682	0.117	3.122	-0.606	11.941	30.222	-1.809	-1.323	2.942	21.857	1.109	32.45
1	6	GG_DA2DA3:DT3DT4_EE	0.164	-0.407	3.176	0.456	0.074	24.424	-0.985	-0.249	3.177	0.174	-1.078	24.428
1	7	GG_DA3DA4:DT2DT3_EE	0.384	-0.452	3.368	2.713	1.981	39.914	-0.893	-0.241	3.361	2.895	-3.966	40.05
1	8	GG_DA4DA5:DT5DT2_IE	0.994	1.358	3.089	2.167	-5.801	-0.463	21.494	21.888	1.152	80.308	30.007	-6.21

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.