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A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 4-Dec-2019 number of released structures: 10490
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NDB ID:
6GO7
PDB ID:
6GO7
 
Base Pair Morphology Step Parameters
CSV Format
Model Number
Step Number
Step Name
Shift
Slide
Rise
Tilt
Roll
Twist
X-Displacement
Y-Displacement
Helical Rise
Inclination
Tip
Helical Twist
1
1
FF_DA1DA2:DT4DT5_HH
-0.202
0.076
3.13
2.386
4.164
26.589
-0.85
1.014
3.076
8.962
-5.135
27.011
1
2
FF_DA2DA3:DT3DT4_HH
0.483
-0.471
3.308
-0.281
5.266
28.388
-2.114
-1.032
3.166
10.622
0.568
28.864
1
3
FF_DA3DA4:DT2DT3_HH
0.137
-0.691
3.156
1.02
2.412
37.739
-1.363
-0.086
3.11
3.723
-1.575
37.826
1
4
FF_DA4DA5:DT1DT2_HH
0.287
-0.656
3.076
-6.657
-0.974
33.856
-0.964
-1.449
2.985
-1.653
11.292
34.499
1
5
GG_DA1DA2:DT4DT5_EE
0.682
0.117
3.122
-0.606
11.941
30.222
-1.809
-1.323
2.942
21.857
1.109
32.45
1
6
GG_DA2DA3:DT3DT4_EE
0.164
-0.407
3.176
0.456
0.074
24.424
-0.985
-0.249
3.177
0.174
-1.078
24.428
1
7
GG_DA3DA4:DT2DT3_EE
0.384
-0.452
3.368
2.713
1.981
39.914
-0.893
-0.241
3.361
2.895
-3.966
40.05
1
8
GG_DA4DA5:DT5DT2_IE
0.994
1.358
3.089
2.167
-5.801
-0.463
21.494
21.888
1.152
80.308
30.007
-6.21
The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures',
Nucleic Acids Res
.
31(17)
, 5108-21. Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures',
Nat Protoc
.
3(7)
, 1213-27.